PPDB

 The Plant Proteome Database

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AT4G24310.1   transmembrane protein%2C putative (DUF679)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G02430.1 11Arabidopsis thaliana7E-10120568790 (0)C
AT5G46090.1 11Arabidopsis thaliana1E-5819546650 (0)_
AT4G18425.1 11Arabidopsis thaliana1E-5719346650 (0)_
Os08g01530.1 7Oryza sativa7E-6822552680 (0)M
Os05g48840.1 7Oryza sativa3E-5317650680 (0)C
Os06g24490.1 7Oryza sativa6E-4317544600 (0)C
GRMZM2G098182_P01 3.21Zea mays3E-5617754720 (0)C
Zm00001eb260090_P001 agpv5Zea mays3E-5617754720 (0)C
v1_GRMZM2G098182_P01 4a53Zea mays3E-5617754720 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Abhydrolase_9_N(2) DUF679(1) Promethin(1)
TargetP: Chloroplast (Class 3 C0.635; M0.092; S0.015; _0.151)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 213 aa (-cTP 172) (-lTP 113)
Molecular Weight 23.21 kDA(-cTP 18.71)(-lTP 12.53)
PI 8.37(-cTP 7.87)(-lTP 8.657)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help