PPDB

The Plant Proteome Database

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AT4G23900.1   Nucleoside diphosphate kinase family protein

Lab Annot. NDPK4
Mapman: 23.4.10 nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase
Curated Location not plastid (supported by in-house exprements)

TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G23895.3 11Arabidopsis thaliana5E-1692311001005 (2)_
AT4G11010.1 11Arabidopsis thaliana3E-1502388794225 (191)C
AT4G09320.1 11Arabidopsis thaliana3E-611485878615 (505)_
Os05g51700.1 7Oryza sativa7E-116242698037 (37)C
Os05g51700.2 7Oryza sativa4E-107180828837 (37)M
Os12g36194.1 7Oryza sativa2E-61151577534 (34)C
Zm00001eb345550_P001 agpv5Zea mays5E-11522972840 (0)M
GRMZM5G833747_P03 3.21Zea mays3E-114241708051 (51)C
Zm00001eb297860_P001 agpv5Zea mays3E-11424170800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NDK(1) PSI_PsaJ(1)
TargetP: Mitochondria (Class 4 C0.226; M0.596; S0.011; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 237 aa (-cTP 204)
Molecular Weight 25.77 kDA(-cTP )
PI 9.44(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
119Detail       root [B. rapa] plastid stroma 
120Detail       root [B. rapa] plastid stroma 
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
17216043(leaf)
19334764(plasma membrane (cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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