PPDB

PPDB	The Plant Proteome Database

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AT4G23800.1 HMG (high mobility group) box protein

Lab Annot.

HMG (high mobility group) box protein
Mapman: 27.3.62 RNA.regulation of transcription.Nucleosome/chromatin assembly factor group

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G23800.2 11 Arabidopsis thaliana 0 456 98 98 0 (0) C
AT4G11080.1 11 Arabidopsis thaliana 0 451 78 86 5 (5) C
AT1G20696.2 11 Arabidopsis thaliana 2E-12 118 39 53 14 (13) C
Os02g15810.1 7 Oryza sativa 3E-131 417 54 73 0 (0) M
Os09g37910.4 6 Oryza sativa 3E-09 83 36 56 2 (2) C
Os09g37910.2 6 Oryza sativa 4E-09 83 36 56 2 (2) _
Zm00001eb238060_P001 agpv5 Zea mays 2E-143 417 60 78 0 (0) M
v1_GRMZM2G060253_P01 4a53 Zea mays 2E-143 417 60 78 0 (0) M
GRMZM2G060253_P01 3.21 Zea mays 2E-143 417 60 78 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CHDNT(2) FAS_N(2) HMG_box(3) HMG_box_2(3) KRAB(1)
TargetP:	Chloroplast (Class 4 C0.809; M0.044; S0.098; _0.460)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	456 aa (-cTP 419)
Molecular Weight	53.23 kDA(-cTP 49.22)
PI	9.30(-cTP 9.18)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1213	Detail								leaf [A. thaliana]	total leaf tissue	P3-StrepII complemented

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data