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AT4G23630.1
VIRB2-interacting protein 1
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| Lab Annot. |
BTI1 (VIRB2-INTERACTING PROTEIN 1), RTLNB1 - cytosol & ER
Mapman: 35.1 not assigned.no ontology |
| Curated Location |
cytosol (Pubmed: 15494553 20424177 )
ER (Pubmed: 15494553 20424177 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
BRI3BP(2) Reticulon(1) |
| TargetP: |
Cytoplasm (Class 3 C0.317; M0.061; S0.059; _0.830) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
3 TMs |
| Aramemnon: |
4 TMs |
| TAT position: |
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| Length |
275 aa (-cTP 212) |
| Molecular Weight |
30.53 kDA(-cTP ) |
| PI |
8.32(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 361 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 1350 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 3) |
| 1398 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 | Prep1_Prep2 |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1410 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.2 | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1420 | Detail | | | | | | | | [A. thaliana] | | |
| 1422 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 2) |
| 1426 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 3) |
| 1427 | Detail | | | | | | | | [A. thaliana] | total leaf tissue 1.11 | wild-type |
| 1428 | Detail | | | | | | | | [A. thaliana] | total leaf tissue 1.11 | Prep1_Prep2_t1_t2 |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1442 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 1) |
| 1443 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 2) |
| 1444 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1611 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast fractionation thylakoid membrane | |
| 1612 | Detail | | | | | | | | Natural Senescence leaf [A. thaliana] | chloroplast fractionation thylakoid membrane | |
| 1744 | Detail | | | | | | | | [A. thaliana] | | Mep-6 |
| 1828 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 Fluctuating light |
| 2246 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2247 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2248 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2249 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2250 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2251 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2252 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2253 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2268 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2269 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2270 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2271 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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15060130(Plasma Membrane proteome)
15539469(vacuole)
16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
17660356(tonoplast (Brassica oleracea buds))
19200160(flower-stage 12)
17216043(leaf)
19253305(phosphoproteins (etiolated seedling))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20166762(whole leaf)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21311031(lysine-acetylated leaf)
21325567(root-proteome (wt & det3))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))
21515685(GreenCut2)
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Comparative Proteomics Data
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