PPDB

PPDB	The Plant Proteome Database

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AT4G23620.1 Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain-containing protein

Lab Annot.

Mapman: 29.2.1.1.3.2.35 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G23620.2 11 Arabidopsis thaliana 0 277 95 95 1 (1) M
AT5G66860.1 11 Arabidopsis thaliana 3E-46 204 40 62 2 (2) M
Os05g18750.1 7 Oryza sativa 2E-111 266 63 77 2 (2) M
Os01g41030.1 7 Oryza sativa 2E-111 221 69 85 2 (2) M
Os03g41612.1 7 Oryza sativa 2E-39 201 37 60 8 (8) M
Zm00001eb357570_P001 agpv5 Zea mays 2E-111 255 63 76 0 (0) M
v1_GRMZM2G423169_P01 4a53 Zea mays 3E-111 255 63 76 2 (2) C
GRMZM2G423169_P01 3.21 Zea mays 3E-111 255 63 76 5 (5) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ribosomal_L25p(2) Ribosomal_TL5_C(1)
TargetP:	Mitochondria (Class 2 C0.016; M0.736; S0.035; _0.038)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	264 aa (-cTP 242)
Molecular Weight	29.02 kDA(-cTP )
PI	9.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
20018591(Co2+ binding (mitochondria - cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21841088(mitochondria (2DE native gel))
21515685(GreenCut2)

Comparative Proteomics Data