PPDB

The Plant Proteome Database

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AT4G23610.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot. Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46150.1 11Arabidopsis thaliana2E-1421728470 (0)C
AT1G64065.1 11Arabidopsis thaliana8E-0822324450 (0)_
AT3G54200.1 11Arabidopsis thaliana4E-0620026504 (4)_
Os01g53470.1 7Oryza sativa2E-1218225540 (0)_
Os05g45070.1 7Oryza sativa3E-1022225490 (0)_
Os11g02730.1 7Oryza sativa3E-0614622410 (0)C
GRMZM2G078771_P01 3.21Zea mays5E-2222427500 (0)_
v1_GRMZM2G078771_P01 4a53Zea mays5E-2222427500 (0)_
Zm00001eb153970_P001 agpv5Zea mays5E-2222427500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1)
TargetP: Cytoplasm (Class 1 C0.022; M0.066; S0.025; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 228 aa (-cTP 204)
Molecular Weight 25.79 kDA(-cTP )
PI 9.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help