PPDB

PPDB	The Plant Proteome Database

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AT4G23450.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G23450.2 11 Arabidopsis thaliana 2E-110 153 100 100 1 (1) _
AT4G23450.3 11 Arabidopsis thaliana 2E-110 153 100 100 1 (1) _
AT4G23450.4 11 Arabidopsis thaliana 5E-110 153 100 100 0 (0) C
Os11g18947.1 7 Oryza sativa 6E-20 171 36 45 0 (0) _
Os11g18947.2 7 Oryza sativa 6E-20 171 36 45 0 (0) _
Os03g40170.1 7 Oryza sativa 6E-19 68 54 67 0 (0) _
Zm00001eb224110_P001 agpv5 Zea mays 3E-24 180 33 48 0 (0) _
v1_GRMZM2G151616_P01 4a53 Zea mays 3E-24 180 33 48 0 (0) _
GRMZM2G151616_P01 3.21 Zea mays 3E-24 180 33 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(2) Prok-RING_4(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1)
TargetP:	Chloroplast (Class 2 C0.929; M0.023; S0.017; _0.274)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	153 aa (-cTP 92)
Molecular Weight	16.94 kDA(-cTP 10.48)
PI	4.83(-cTP 4.55)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data