PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G23430.1   NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot. short-chain dehydrogenase/reductase protein
Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)
Curated Location
TAIR curated location: chloroplast inner membrane0012177442
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G23430.2 11Arabidopsis thaliana032299991 (1)_
AT4G23430.3 11Arabidopsis thaliana032096961 (1)_
AT4G23430.4 11Arabidopsis thaliana032296960 (0)_
Os09g39670.1 7Oryza sativa3E-141311637811 (11)M
Os01g05840.2 7Oryza sativa6E-13331458767 (7)_
Os01g05840.1 7Oryza sativa6E-13331458767 (7)_
GRMZM2G009940_P01 3.21Zea mays1E-14531164771 (1)M
Zm00001eb307680_P003 agpv5Zea mays1E-14531164770 (0)M
v1_GRMZM2G009940_P01 4a53Zea mays1E-14531164772 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: adh_short(1) adh_short_C2(1) Epimerase(1) KR(1)
TargetP: Cytoplasm (Class 5 C0.087; M0.367; S0.047; _0.529)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 320 aa (-cTP 264)
Molecular Weight 34.49 kDA(-cTP )
PI 8.96(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

12766230(Total chloroplast envelope)
18431481(chloroplast)
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help