PPDB

 The Plant Proteome Database

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AT4G23070.1   RHOMBOID-like protein 7
Lab Annot. rhomboid protease 7 (AtRBL7)
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12750.7 11Arabidopsis thaliana2E-12030455710 (0)M
AT1G12750.4 11Arabidopsis thaliana2E-12030455710 (0)M
AT1G12750.6 11Arabidopsis thaliana2E-12030455710 (0)M
Os03g02530.1 7Oryza sativa1E-11532252690 (0)_
Os09g35730.1 7Oryza sativa9E-113291567149 (49)_
Os08g43320.1 7Oryza sativa8E-110312526724 (24)_
Zm00001eb021350_P001 agpv5Zea mays8E-11233052640 (0)_
GRMZM2G093962_P02 3.21Zea mays8E-11233052640 (0)_
v1_GRMZM2G093962_P02 4a53Zea mays8E-11233052640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DER1(2) Rhomboid(3)
TargetP: Cytoplasm (Class 1 C0.053; M0.038; S0.050; _0.990)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 313 aa (-cTP 230)
Molecular Weight 34.53 kDA(-cTP )
PI 7.99(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help