PPDB

PPDB	The Plant Proteome Database

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AT4G22970.1 separase

Lab Annot.

peptidase (AESP)
Mapman: 29.5.3.2.3* protein.degradation.cysteine protease.CD.C50

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G22970.3 11 Arabidopsis thaliana 0 2181 99 99 0 (0) _
AT4G22970.2 11 Arabidopsis thaliana 0 2180 99 99 4 (4) _
AT5G28550.1 11 Arabidopsis thaliana 4E-43 193 44 58 0 (0) _
Os02g53120.1 7 Oryza sativa 2E-174 921 37 55 0 (0) _
Zm00001eb193470_P002 agpv5 Zea mays 0 2274 31 49 0 (0) _
Zm00001eb193470_P001 agpv5 Zea mays 0 2276 31 49 0 (0) _
GRMZM2G300624_P01 3.21 Zea mays 0 1801 32 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CHAT(2) Ku_PK_bind(1) Peptidase_C50(1) SH2(1) TPR_12(4) TPR_2(3)
TargetP:	Cytoplasm (Class 5 C0.393; M0.034; S0.031; _0.580)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	2180 aa (-cTP 2132)
Molecular Weight	244.84 kDA(-cTP )
PI	6.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2262	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2263	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 trap

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data