PPDB

 The Plant Proteome Database

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AT4G22840.1   Sodium Bile acid symporter family
Lab Annot. bile acid:sodium symporter family
Mapman: 34.8 transport.metabolite transporters at the envelope membrane
Curated Location envelope-inner-integral (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G12030.2 11Arabidopsis thaliana041568790 (0)C
AT4G12030.4 11Arabidopsis thaliana8E-17931678880 (0)S
AT4G12030.3 11Arabidopsis thaliana6E-15627380890 (0)_
Os09g34900.1 7Oryza sativa4E-16340860740 (0)C
Os02g27490.1 7Oryza sativa5E-6731242630 (0)C
Os02g27490.2 7Oryza sativa5E-6731242630 (0)C
GRMZM2G149619_P01 3.21Zea mays2E-16340859731 (1)C
v1_GRMZM2G149619_P01 4a53Zea mays2E-16340859732 (2)C
Zm00001eb318760_P002 agpv5Zea mays2E-16340859730 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SBF(2) SBF_like(1)
TargetP: Chloroplast (Class 5 C0.400; M0.358; S0.018; _0.102)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 8 TMs
Aramemnon: 8 TMs
TAT position:
Length 409 aa (-cTP 387) (-lTP 302)
Molecular Weight 44.21 kDA(-cTP 41.70)(-lTP 32.22)
PI 9.79(-cTP 9.68)(-lTP 9.489)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19995728(proplastid (Brassica napus))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help