PPDB

The Plant Proteome Database

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AT4G22517.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot. Protease inhibitor/seed storage/LTP protein
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22513.1 11Arabidopsis thaliana7E-6011593978 (7)S
AT4G22520.1 11Arabidopsis thaliana2E-1812245562 (2)S
AT4G12550.1 11Arabidopsis thaliana4E-1310940570 (0)S
Os02g44310.1 7Oryza sativa8E-0814135430 (0)S
Os04g46830.1 7Oryza sativa2E-0786365510 (10)S
Os06g01580.1 7Oryza sativa3E-078643590 (0)S
GRMZM2G429000_P01 3.21Zea mays2E-07913154178 (177)S
v1_GRMZM2G429000_P01 4a53Zea mays2E-07913154224 (224)S
v1_GRMZM2G398807_P01 4a53Zea mays2E-0786365431 (31)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hydrophob_seed(1) LTP_2(1)
TargetP: Secreted (Class 1 C0.004; M0.008; S0.874; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 115 aa (-cTP 42)
Molecular Weight 12.22 kDA(-cTP )
PI 8.77(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1351Detail       leaf [A. thaliana] total tissue t1-t2
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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