PPDB

PPDB	The Plant Proteome Database

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AT4G22490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot.

protease inhibitor/seed storage/lipid transfer protein (LTP) protein
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G12530.1 11 Arabidopsis thaliana 5E-14 119 36 53 0 (0) S
AT4G12470.1 11 Arabidopsis thaliana 8E-14 85 42 57 0 (0) S
AT2G45180.1 11 Arabidopsis thaliana 3E-13 83 39 54 138 (126) S
Os02g44310.1 7 Oryza sativa 9E-14 87 43 55 0 (0) S
Os04g46810.1 7 Oryza sativa 1E-13 85 41 54 0 (0) S
Os04g46820.1 7 Oryza sativa 4E-13 85 40 54 0 (0) S
Zm00001eb249760_P001 agpv5 Zea mays 3E-14 85 41 54 0 (0) S
v1_GRMZM2G410338_P01 4a53 Zea mays 3E-14 85 41 54 0 (0) S
GRMZM2G410338_P01 3.21 Zea mays 3E-14 85 41 54 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Hydrophob_seed(1) LTP_2(1)
TargetP:	Secreted (Class 4 C0.715; M0.002; S0.953; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	120 aa (-cTP 63)
Molecular Weight	12.78 kDA(-cTP )
PI	8.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1871	Detail								Total leaf [A. thaliana]	Stroma	wild-type
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))

Comparative Proteomics Data