PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G22380.1   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Lab Annot. ribosomal protein L7Ae/L30e/S12e/Gadd45 protein
Mapman: 29.2.1.2.2.1730 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7/L30/S12
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20160.1 11Arabidopsis thaliana1E-901289910031 (19)_
AT5G20160.2 11Arabidopsis thaliana6E-84160798031 (19)_
AT4G12600.1 11Arabidopsis thaliana1E-76128959610 (6)_
Os03g13800.1 7Oryza sativa2E-73128909631 (31)_
Os10g03540.1 7Oryza sativa6E-6512387919 (9)_
Os02g49610.1 7Oryza sativa3E-1912133530 (0)_
GRMZM5G868062_P03 3.21Zea mays6E-7012390955 (5)_
v1_GRMZM2G140799_P01 4a53Zea mays9E-70124899559 (59)_
Zm00001eb399010_P002 agpv5Zea mays9E-7012489950 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adenosine_kin(2) PELOTA_1(1) Ribosomal_L7Ae(1) SLBB(2)
TargetP: Cytoplasm (Class 2 C0.050; M0.126; S0.077; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 128 aa (-cTP 72)
Molecular Weight 13.92 kDA(-cTP )
PI 6.72(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1620Detail        [A. thaliana] m48
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help