PPDB

The Plant Proteome Database

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AT4G22330.1   Alkaline phytoceramidase (aPHC)

Lab Annot. ATCES1; catalytic
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g49180.1 7Oryza sativa7E-14825675860 (0)_
Zm00001eb216900_P003 agpv5Zea mays9E-14625674850 (0)_
Zm00001eb216900_P001 agpv5Zea mays9E-14625674850 (0)_
GRMZM2G300944_P04 3.21Zea mays9E-14625674850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ceramidase(1) Peptidase_A8(2)
TargetP: Cytoplasm (Class 1 C0.021; M0.027; S0.079; _0.963)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 255 aa (-cTP 236)
Molecular Weight 29.74 kDA(-cTP )
PI 8.98(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

22430844(Golgi-cell-culture)

Comparative Proteomics Data


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