PPDB

PPDB	The Plant Proteome Database

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AT4G22250.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G03965.1 11 Arabidopsis thaliana 1E-84 220 65 73 0 (0) _
AT1G62370.1 11 Arabidopsis thaliana 4E-42 225 45 58 1 (1) _
AT3G25030.1 11 Arabidopsis thaliana 2E-34 210 38 56 0 (0) _
Os01g68900.1 7 Oryza sativa 3E-23 50 82 90 0 (0) _
Os08g41520.1 7 Oryza sativa 1E-18 47 72 80 0 (0) M
Os09g32730.1 7 Oryza sativa 2E-18 49 67 79 0 (0) M
Zm00001eb364690_P001 agpv5 Zea mays 3E-23 50 82 90 0 (0) _
GRMZM2G082376_P01 3.21 Zea mays 3E-23 50 82 90 0 (0) _
v1_GRMZM2G082376_P01 4a53 Zea mays 3E-23 50 82 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4_4(1) zf-rbx1(1)
TargetP:	Cytoplasm (Class 3 C0.215; M0.143; S0.006; _0.761)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	214 aa (-cTP 186)
Molecular Weight	24.06 kDA(-cTP )
PI	5.80(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data