PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G22140.1   PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein

Lab Annot. PHD finger protein / bromo-adjacent homology (BAH) domain-containing protein
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22140.3 11Arabidopsis thaliana1E-1782341001000 (0)_
AT4G22140.2 11Arabidopsis thaliana5E-1652171001003 (1)_
AT4G04260.2 11Arabidopsis thaliana7E-10718482870 (0)_
Os09g21770.1 7Oryza sativa7E-12020873860 (0)_
Os08g32620.1 7Oryza sativa4E-11520172870 (0)_
Os07g08880.2 7Oryza sativa2E-10221962800 (0)_
Zm00001eb311820_P004 agpv5Zea mays1E-12020871880 (0)_
GRMZM2G091265_P05 3.21Zea mays1E-12020871880 (0)_
v1_GRMZM2G091265_P05 4a53Zea mays1E-12020871880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BAH(1) PHD(2) PHD_2(1) PHD_4(2) zf-PHD-like(2)
TargetP: Cytoplasm (Class 3 C0.076; M0.313; S0.037; _0.832)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 234 aa (-cTP 197)
Molecular Weight 26.57 kDA(-cTP )
PI 8.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help