PPDB

The Plant Proteome Database

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AT4G21980.1   Ubiquitin-like superfamily protein

Lab Annot. ATG8a - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
TAIR curated location: cytoplasm & autophagic vacuole16040659
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21980.2 11Arabidopsis thaliana2E-861221001001 (1)C
AT4G04620.1 11Arabidopsis thaliana2E-7711890961 (1)_
AT4G04620.2 11Arabidopsis thaliana2E-7711890961 (1)_
Os08g09240.2 7Oryza sativa6E-7311787950 (0)_
Os08g09240.1 7Oryza sativa6E-7311787950 (0)_
Os07g32800.1 7Oryza sativa1E-7011884940 (0)M
Zm00001eb171400_P002 agpv5Zea mays1E-7211985940 (0)_
Zm00001eb171400_P003 agpv5Zea mays1E-7211985940 (0)_
GRMZM2G134613_P02 3.21Zea mays3E-72117869417 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 4 C0.207; M0.136; S0.106; _0.539)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 122 aa (-cTP 109)
Molecular Weight 13.69 kDA(-cTP )
PI 8.78(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2254Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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