PPDB

PPDB	The Plant Proteome Database

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AT4G21450.1 PapD-like superfamily protein

Lab Annot.

vesicle-associated membrane protein / VAMP protein
Mapman: 31.4 cell.vesicle transport

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G21450.3 11 Arabidopsis thaliana 0 314 93 93 15 (10) _
AT4G21450.2 11 Arabidopsis thaliana 1E-155 210 100 100 0 (0) _
AT4G05060.1 11 Arabidopsis thaliana 1E-119 297 68 79 0 (0) C
Os08g04620.1 7 Oryza sativa 2E-102 184 81 92 5 (5) C
Os07g37270.1 7 Oryza sativa 1E-97 203 78 87 1 (1) _
Os02g43594.1 7 Oryza sativa 4E-11 125 32 52 0 (0) _
v1_GRMZM2G145951_P02 4a53 Zea mays 1E-99 185 80 91 0 (0) C
v1_GRMZM2G145951_P01 4a53 Zea mays 1E-99 185 80 91 0 (0) C
Zm00001eb172980_P001 agpv5 Zea mays 1E-99 185 80 91 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alpha_adaptinC2(1) Innate_immun(1) Motile_Sperm(1) PAP1(1) SelP_N(1)
TargetP:	Cytoplasm (Class 5 C0.540; M0.092; S0.003; _0.586)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	295 aa (-cTP 261)
Molecular Weight	32.96 kDA(-cTP )
PI	9.39(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1535	Detail								leaf [A. thaliana]		wild-type
1536	Detail								leaf [A. thaliana]		wild-type
2254	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data