PPDB

PPDB	The Plant Proteome Database

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AT4G21350.1 plant U-box 8

Lab Annot.

plant U-box 8
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46510.1 11 Arabidopsis thaliana 8E-51 375 33 53 5 (3) _
AT2G28830.1 11 Arabidopsis thaliana 2E-48 379 31 56 4 (4) S
AT1G23030.1 11 Arabidopsis thaliana 1E-47 372 33 54 0 (0) _
Os02g49950.1 7 Oryza sativa 4E-55 378 35 55 0 (0) _
Os06g01304.3 7 Oryza sativa 2E-53 368 33 55 0 (0) _
Os06g01304.2 7 Oryza sativa 7E-53 368 33 55 0 (0) C
GRMZM2G304010_P01 3.21 Zea mays 2E-64 363 43 61 0 (0) _
v1_GRMZM2G304010_P01 4a53 Zea mays 2E-64 363 43 61 0 (0) _
Zm00001eb416740_P001 agpv5 Zea mays 2E-64 363 43 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arm(5) DUF3361(2) HEAT_2(2) U-box(1) zf-Nse(1) zf-RING_UBOX(1)
TargetP:	Cytoplasm (Class 2 C0.045; M0.095; S0.024; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	374 aa (-cTP 334)
Molecular Weight	40.87 kDA(-cTP )
PI	6.98(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data