PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G21340.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05170.1 11Arabidopsis thaliana4E-6630746570 (0)_
AT4G05170.2 11Arabidopsis thaliana6E-6630746570 (0)_
AT4G05170.5 11Arabidopsis thaliana4E-5929445560 (0)_
Os05g42180.1 7Oryza sativa6E-3611559740 (0)_
Os04g53990.1 7Oryza sativa4E-3211556730 (0)_
Os01g57580.1 7Oryza sativa3E-2810059750 (0)C
Zm00001eb151270_P004 agpv5Zea mays6E-3711462780 (0)C
v1_GRMZM2G440529_P01 4a53Zea mays7E-3711462780 (0)C
GRMZM2G440529_P01 3.21Zea mays7E-3711462780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(2) RE_TdeIII(1) Tom22(1)
TargetP: Cytoplasm (Class 2 C0.102; M0.186; S0.069; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 301 aa (-cTP 271)
Molecular Weight 34.03 kDA(-cTP )
PI 4.96(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help