PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G21080.1   Dof-type zinc finger domain-containing protein

Lab Annot.
Mapman: 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21040.1 11Arabidopsis thaliana7E-11125475790 (0)_
AT4G21050.1 11Arabidopsis thaliana5E-7618965740 (0)_
AT4G21030.1 11Arabidopsis thaliana2E-4818950660 (0)_
Os05g36900.1 7Oryza sativa1E-2110346600 (0)C
Os03g55610.1 7Oryza sativa2E-216762710 (0)C
Os07g13260.1 7Oryza sativa2E-216762710 (0)_
Zm00001eb094330_P001 agpv5Zea mays3E-236566720 (0)_
v1_GRMZM2G146283_P01 4a53Zea mays3E-236566720 (0)_
GRMZM2G146283_P01 3.21Zea mays3E-236566720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-Dof(2)
TargetP: Cytoplasm (Class 1 C0.062; M0.051; S0.029; _0.967)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 249 aa (-cTP 220)
Molecular Weight 28.09 kDA(-cTP )
PI 8.65(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help