PPDB

PPDB	The Plant Proteome Database

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AT4G20870.1 fatty acid hydroxylase 2

Lab Annot.

Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G20870.2 11 Arabidopsis thaliana 8E-176 237 100 100 0 (0) _
AT2G34770.1 11 Arabidopsis thaliana 1E-125 237 69 80 0 (0) _
Os03g56820.1 7 Oryza sativa 1E-124 237 70 80 14 (14) _
Os03g56820.3 7 Oryza sativa 2E-124 237 70 80 14 (14) _
Os03g56820.2 7 Oryza sativa 2E-124 237 70 80 14 (14) _
GRMZM2G038964_P02 3.21 Zea mays 2E-123 237 70 78 15 (15) _
Zm00001eb059630_P003 agpv5 Zea mays 2E-123 237 70 78 0 (0) _
Zm00001eb059630_P001 agpv5 Zea mays 2E-123 237 70 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CPBP(1) ECF_trnsprt(2) FA_hydroxylase(1)
TargetP:	Cytoplasm (Class 3 C0.017; M0.131; S0.258; _0.798)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	4 TMs
TAT position:
Length	237 aa (-cTP 164)
Molecular Weight	27.31 kDA(-cTP )
PI	9.02(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data