PPDB

 The Plant Proteome Database

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AT4G20840.1   FAD-binding Berberine family protein
Lab Annot. FAD-binding Berberine protein
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20830.2 11Arabidopsis thaliana0509869481 (33)S
AT4G20830.1 11Arabidopsis thaliana0505869488 (40)S
AT1G11770.1 11Arabidopsis thaliana053365790 (0)S
Os06g35700.1 7Oryza sativa3E-13251243620 (0)S
Os06g35590.1 7Oryza sativa3E-13250842630 (0)S
Os06g35650.1 7Oryza sativa3E-12951642610 (0)S
Zm00001eb277710_P001 agpv5Zea mays2E-13853643610 (0)S
GRMZM2G403076_P01 3.21Zea mays1E-13753643610 (0)_
GRMZM2G080839_P01 3.21Zea mays1E-13750844620 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BBE(1) FAD_binding_4(1)
TargetP: Secreted (Class 1 C0.022; M0.017; S0.872; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 539 aa (-cTP 514)
Molecular Weight 60.14 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
18538804(apoplast)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data

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