PPDB

 The Plant Proteome Database

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AT4G20820.1   FAD-binding Berberine family protein
Lab Annot.
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44440.1 11Arabidopsis thaliana053363801 (1)S
AT5G44440.2 11Arabidopsis thaliana053363800 (0)_
AT5G44410.1 11Arabidopsis thaliana054062770 (0)S
Os06g35700.1 7Oryza sativa2E-14850247640 (0)S
Os06g35590.1 7Oryza sativa2E-14850447640 (0)S
Os06g35560.1 7Oryza sativa2E-14251246630 (0)S
GRMZM2G031941_P01 3.21Zea mays8E-15650947640 (0)S
Zm00001eb384940_P001 agpv5Zea mays8E-15650947640 (0)S
v1_GRMZM2G031941_P01 4a53Zea mays8E-15650947640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BBE(2) FAD_binding_4(1)
TargetP: Chloroplast (Class 4 C0.543; M0.011; S0.342; _0.004)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 532 aa (-cTP 465)
Molecular Weight 60.39 kDA(-cTP 52.99)
PI 8.96(-cTP 8.93)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help