PPDB

The Plant Proteome Database

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AT4G20740.1   Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06710.15 11Arabidopsis thaliana4E-4765225430 (0)M
AT1G06710.10 11Arabidopsis thaliana4E-4765225430 (0)M
AT1G06710.11 11Arabidopsis thaliana4E-4765225430 (0)M
Os07g08180.1 7Oryza sativa070943650 (0)C
Os07g08180.2 7Oryza sativa070943650 (0)C
Os02g16650.1 7Oryza sativa5E-5059824450 (0)M
GRMZM2G406746_P01 3.21Zea mays073144650 (0)C
v1_GRMZM2G406746_P01 4a53Zea mays073144650 (0)C
Zm00001eb301300_P001 agpv5Zea mays073144650 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTAD(3) DED(3) MRP-S27(3) Mtf2(2) PPR(13) PPR_1(10) PPR_2(12) PPR_3(8) PPR_long(
TargetP: Chloroplast (Class 5 C0.583; M0.114; S0.001; _0.490)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 727 aa (-cTP 682)
Molecular Weight 82.43 kDA(-cTP 77.30)
PI 8.26(-cTP 6.53)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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