PPDB

PPDB	The Plant Proteome Database

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AT4G20410.1 gamma-soluble NSF attachment protein

Lab Annot.

gamma-soluble NSF attachment protein / gamma-SNA
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G20410.2 11 Arabidopsis thaliana 0 277 99 100 0 (0) _
Os04g52760.1 7 Oryza sativa 4E-106 222 66 81 22 (22) _
GRMZM2G145175_P02 3.21 Zea mays 1E-146 292 67 83 0 (0) _
v1_GRMZM2G145175_P02 4a53 Zea mays 1E-146 292 67 83 0 (0) _
Zm00001eb431060_P002 agpv5 Zea mays 1E-146 292 67 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DHR-2(1) DUF410(3) Mad3_BUB1_I(2) MIT(3) NSF(5) SNAP(1) TPR_1(5) TPR_12(5) TPR_1
TargetP:	Cytoplasm (Class 2 C0.088; M0.175; S0.085; _0.839)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	291 aa (-cTP 249)
Molecular Weight	32.36 kDA(-cTP )
PI	4.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21693672(wound-regulated leaf proteome (wt))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data