PPDB

PPDB	The Plant Proteome Database

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AT4G20380.7 LSD1 zinc finger family protein

Lab Annot.

LSD1 zinc finger protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G20380.2 11 Arabidopsis thaliana 5E-137 189 100 100 0 (0) _
AT4G20380.1 11 Arabidopsis thaliana 8E-133 184 100 100 0 (0) M
AT4G20380.3 11 Arabidopsis thaliana 8E-133 184 100 100 0 (0) M
Os12g41700.1 7 Oryza sativa 2E-66 185 60 71 0 (0) C
Os03g43840.1 7 Oryza sativa 1E-65 195 57 68 0 (0) M
Os08g06280.3 7 Oryza sativa 9E-44 124 59 72 0 (0) C
v1_GRMZM2G114613_P04 4a53 Zea mays 6E-63 190 55 66 0 (0) M
Zm00001eb135920_P005 agpv5 Zea mays 6E-63 190 55 66 0 (0) M
GRMZM2G114613_P04 3.21 Zea mays 6E-63 190 55 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2197(3) Ribosomal_S27e(3) RNA_POL_M_15KD(3) Tmemb_55A(1) YABBY(2) zf-LSD1(3)
TargetP:	Cytoplasm (Class 3 C0.029; M0.174; S0.060; _0.584)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	189 aa (-cTP 98)
Molecular Weight	20.11 kDA(-cTP )
PI	8.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data