PPDB

The Plant Proteome Database

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AT4G20330.1   Transcription initiation factor TFIIE%2C beta subunit

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21010.1 11Arabidopsis thaliana3E-11328167791 (1)C
Os10g25770.2 7Oryza sativa8E-11928262790 (0)C
Os10g25770.1 7Oryza sativa8E-11928262790 (0)C
Os03g07930.1 7Oryza sativa2E-7125052680 (0)_
v1_GRMZM2G177263_P01 4a53Zea mays3E-11628262780 (0)C
Zm00001eb071210_P002 agpv5Zea mays3E-11628262780 (0)C
Zm00001eb071210_P001 agpv5Zea mays3E-11628262780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PRKG1_interact(2) TFA2_Winged_2(1) TFIIE_beta(2)
TargetP: Chloroplast (Class 5 C0.477; M0.413; S0.009; _0.160)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 286 aa (-cTP 245)
Molecular Weight 32.43 kDA(-cTP 27.83)
PI 9.46(-cTP 9.29)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21311031(chloroplasts)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help