PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G20110.1   VACUOLAR SORTING RECEPTOR 7

Lab Annot.
Mapman: 29.3.4.3 protein.targeting.secretory pathway.vacuole
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20110.2 11Arabidopsis thaliana062998990 (0)S
AT1G30900.1 11Arabidopsis thaliana061170851 (0)S
AT2G34940.1 11Arabidopsis thaliana061263790 (0)S
Os06g45380.1 7Oryza sativa059866794 (4)S
Os10g20630.1 7Oryza sativa060161762 (2)S
Os04g52190.1 7Oryza sativa060363750 (0)S
v1_GRMZM2G115660_P01 4a53Zea mays062263760 (0)S
GRMZM2G115660_P01 3.21Zea mays062263764 (0)S
Zm00001eb389750_P001 agpv5Zea mays062263760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: cEGF(3) PA(1) PBP_N(2)
TargetP: Secreted (Class 1 C0.003; M0.075; S0.989; _0.029)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 625 aa (-cTP 605)
Molecular Weight 69.80 kDA(-cTP )
PI 5.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17432890(leaf total membranes)
21826108(SYP trans-Golgi-filtered)
21325567(root-proteome (wt & det3))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help