PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G20090.2 11 Arabidopsis thaliana 0 660 100 100 0 (0) C
AT5G64320.1 11 Arabidopsis thaliana 2E-98 619 31 51 0 (0) M
AT3G53700.1 11 Arabidopsis thaliana 3E-85 609 29 51 65 (51) C
Os06g30420.1 7 Oryza sativa 4E-134 481 41 61 0 (0) M
Os01g63400.1 7 Oryza sativa 1E-82 500 30 53 0 (0) _
Os01g63400.2 7 Oryza sativa 1E-82 500 30 53 0 (0) _
Zm00001eb064820_P001 agpv5 Zea mays 5E-123 482 39 59 0 (0) M
GRMZM2G110851_P01 3.21 Zea mays 5E-123 482 39 59 0 (0) M
v1_GRMZM2G110851_P01 4a53 Zea mays 5E-123 482 39 59 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_32(2) AEP1(4) DNA_pol3_delta2(1) DUF3368(3) MRP-S27(5) PIN(3) PPR(14) PPR_1(
TargetP:	Chloroplast (Class 3 C0.672; M0.047; S0.096; _0.024)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	660 aa (-cTP 600) (-lTP 529)
Molecular Weight	74.12 kDA(-cTP 67.42)(-lTP 59.42)
PI	8.71(-cTP 8.69)(-lTP 8.546)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data