PPDB

 The Plant Proteome Database

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AT4G20050.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20050.5 11Arabidopsis thaliana04811001000 (0)_
AT4G20050.7 11Arabidopsis thaliana04811001000 (0)S
AT4G20050.6 11Arabidopsis thaliana04811001000 (0)S
Os04g52320.1 7Oryza sativa5E-17545156710 (0)M
Zm00001eb070980_P001 agpv5Zea mays2E-17444357720 (0)S
GRMZM2G045596_P01 3.21Zea mays2E-17444357721 (1)S
v1_GRMZM2G045596_P01 4a53Zea mays2E-17444357727 (7)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: MecA_N(1) Pectate_lyase_3(2)
TargetP: Secreted (Class 1 C0.025; M0.017; S0.909; _0.063)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 481 aa (-cTP 433)
Molecular Weight 51.66 kDA(-cTP )
PI 5.65(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help