PPDB

The Plant Proteome Database

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AT4G20040.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20050.1 11Arabidopsis thaliana3E-13849247640 (0)S
AT4G20050.7 11Arabidopsis thaliana3E-13849247640 (0)S
AT4G20050.6 11Arabidopsis thaliana3E-13849247640 (0)S
Os04g52320.1 7Oryza sativa3E-14145947630 (0)M
Zm00001eb070980_P001 agpv5Zea mays6E-13445845620 (0)S
GRMZM2G045596_P01 3.21Zea mays6E-13445845621 (1)S
v1_GRMZM2G045596_P01 4a53Zea mays6E-13445845627 (7)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adeno_E1B_55K(2) Beta_helix(3) Pectate_lyase_3(3)
TargetP: Secreted (Class 3 C0.154; M0.017; S0.730; _0.059)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 483 aa (-cTP 467)
Molecular Weight 52.35 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help