PPDB

The Plant Proteome Database

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AT4G20030.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot. RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G20930.1 11Arabidopsis thaliana1E-167745709 (9)C
AT3G46020.1 11Arabidopsis thaliana3E-158037710 (0)M
AT5G06210.1 11Arabidopsis thaliana5E-159935540 (0)M
Os01g31810.2 7Oryza sativa9E-188141670 (0)M
Os02g49820.1 7Oryza sativa2E-178445660 (0)C
Os04g33810.1 7Oryza sativa1E-159835580 (0)M
v1_GRMZM2G044422_P02 4a53Zea mays8E-1710040608 (8)C
Zm00001eb253560_P002 agpv5Zea mays8E-1710040600 (0)C
GRMZM5G899787_P01 3.21Zea mays8E-17100406012 (12)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_5(1) RRM_7(1)
TargetP: Chloroplast (Class 2 C0.861; M0.211; S0.071; _0.022)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 152 aa (-cTP 122)
Molecular Weight 17.39 kDA(-cTP 13.98)
PI 6.35(-cTP 4.92)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help