PPDB

The Plant Proteome Database

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AT4G20010.1   plastid transcriptionally active 9

Lab Annot. Organellar single-stranded DNA binding protein 2 (OSB2) - also PTAC9 - nucleoid
Mapman: 28.3* DNA.plastid nucleoid interacting
Curated Location plastid (Pubmed: 23198870 17189342 18431481 )

TAIR curated location: plastid chromosome16326926
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20010.2 11Arabidopsis thaliana037199996 (5)_
AT5G44785.1 11Arabidopsis thaliana4E-14736960720 (0)M
AT5G44785.2 11Arabidopsis thaliana4E-14537159710 (0)M
Os01g72049.1 7Oryza sativa2E-6231539540 (0)M
Os01g72049.2 7Oryza sativa7E-4525937520 (0)M
Os03g43420.1 7Oryza sativa2E-2321931487 (7)C
Zm00001eb363090_P002 agpv5Zea mays1E-5132535510 (0)M
Zm00001eb363090_P004 agpv5Zea mays6E-4834932480 (0)M
Zm00001eb363090_P003 agpv5Zea mays6E-4834932480 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SSB(1)
TargetP: Cytoplasm (Class 5 C0.254; M0.177; S0.071; _0.297)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 371 aa (-cTP 351)
Molecular Weight 41.73 kDA(-cTP )
PI 8.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

16326926(nucleoids)

Comparative Proteomics Data


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