PPDB

The Plant Proteome Database

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AT4G19810.1   Glycosyl hydrolase family protein with chitinase insertion domain-containing protein

Lab Annot. glycosyl hydrolase family 18 protein
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G19810.2 11Arabidopsis thaliana03791001000 (0)S
AT4G19820.1 11Arabidopsis thaliana037075830 (0)S
AT4G19800.1 11Arabidopsis thaliana1E-17033768810 (0)_
Os11g27400.1 7Oryza sativa1E-5737832520 (0)S
Os04g30770.1 7Oryza sativa2E-4938634500 (0)S
v1_GRMZM2G141456_P02 4a53Zea mays2E-5436334530 (0)S
Zm00001eb169950_P002 agpv5Zea mays2E-5436334530 (0)S
AC211652.4_FGP003 3.21Zea mays2E-5436334530 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_18(1)
TargetP: Secreted (Class 1 C0.004; M0.012; S0.944; _0.075)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 379 aa (-cTP 359)
Molecular Weight 41.13 kDA(-cTP )
PI 8.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help