PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G19770.1   Glycosyl hydrolase family protein with chitinase insertion domain-containing protein

Lab Annot. glycosyl hydrolase family 18 protein
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G19800.1 11Arabidopsis thaliana1E-14126175850 (0)_
AT4G19810.2 11Arabidopsis thaliana1E-11525564760 (0)S
AT4G19810.1 11Arabidopsis thaliana1E-115255647614 (8)S
Os11g27400.1 7Oryza sativa6E-4527333510 (0)S
Os04g30770.1 7Oryza sativa1E-4225635510 (0)S
v1_GRMZM2G141456_P01 4a53Zea mays7E-3827332510 (0)S
v1_GRMZM2G141456_P02 4a53Zea mays8E-3827332510 (0)S
Zm00001eb169950_P002 agpv5Zea mays8E-3827332510 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Choline_kinase(2) Glyco_hydro_18(1)
TargetP: Cytoplasm (Class 5 C0.019; M0.094; S0.477; _0.512)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 261 aa (-cTP 258)
Molecular Weight 28.79 kDA(-cTP )
PI 4.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help