PPDB

 The Plant Proteome Database

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AT4G19640.1   Ras-related small GTP-binding family protein
Lab Annot. Ras-related GTP-binding protein - multiple locations
Mapman: 30.5 signalling.G-proteins
Curated Location ER (Pubmed: 16856980 16723734 16399085 16103374 15743878 1565962 15546360 12553910 11532937 11532937 15509844 15561767 )
golgi (Pubmed: 16856980 16723734 16399085 16103374 15743878 1565962 15546360 12553910 11532937 11532937 15509844 15561767 )
vacuole (Pubmed: 16856980 16723734 16399085 16103374 15743878 1565962 15546360 12553910 11532937 11532937 15509844 15561767 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45130.1 11Arabidopsis thaliana3E-13520090963 (3)S
AT5G45130.2 11Arabidopsis thaliana6E-12718791950 (0)S
AT4G19640.3 11Arabidopsis thaliana4E-9714295990 (0)S
Os03g46390.1 7Oryza sativa9E-114201808814 (14)_
Os12g43550.2 7Oryza sativa3E-11119977873 (3)_
Os12g43550.1 7Oryza sativa4E-10224763713 (3)_
Zm00001eb032760_P002 agpv5Zea mays1E-11220079880 (0)_
GRMZM2G131254_P01 3.21Zea mays1E-112200798814 (7)_
v1_GRMZM2G131254_P01 4a53Zea mays1E-11220079889 (8)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_22(2) ABC_tran(1) Arf(1) ATPase(2) ETC_C1_NDUFA4(1) GTP_EFTU(1) Gtr1_RagA(1)
TargetP: Secreted (Class 4 C0.025; M0.079; S0.787; _0.517)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 200 aa (-cTP 148)
Molecular Weight 21.87 kDA(-cTP )
PI 5.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1471Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clps (rep. 1-2)
1526Detail       leaf [A. thaliana] co-IP GST-ClpS 100ug bait stromaclpc1 x clps (rep. 2)
2118Detail       leaf [A. thaliana] Stroma GST pull down stromaClp F x Clp S1
2171Detail       leaf [A. thaliana] stroma Clp gst against clpF stroma
2172Detail       leaf [A. thaliana] stroma Clp gst against clpF/clpS1 stroma
2173Detail       leaf [A. thaliana] stroma Clp gst clpF against clpF stroma
2174Detail       leaf [A. thaliana] stroma Clp gst clpF against clpFclpS1
2179Detail       leaf [A. thaliana] stroma Clp GST ClpF x ClpS1
2181Detail       leaf [A. thaliana] stroma Clp ClpF x ClpS1
2249Detail       seedlings [A. thaliana] total tissue gfs9
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(UNKNOWN-LOPIT-callus)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help