PPDB

PPDB	The Plant Proteome Database

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AT4G19610.1 nucleotide/nucleic acid binding protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08695.1 11 Arabidopsis thaliana 0 736 63 72 0 (0) _
AT5G05720.1 11 Arabidopsis thaliana 1E-64 292 48 59 0 (0) _
AT1G49760.2 11 Arabidopsis thaliana 1E-12 406 24 43 276 (128) S
Os04g52200.1 7 Oryza sativa 0 884 48 64 0 (0) M
Os11g14430.1 7 Oryza sativa 2E-13 255 29 45 4 (4) _
Os11g14430.2 7 Oryza sativa 6E-13 255 29 45 2 (2) _
GRMZM2G031529_P01 3.21 Zea mays 0 872 47 65 0 (0) _
Zm00001eb430700_P001 agpv5 Zea mays 0 872 47 65 0 (0) _
v1_GRMZM2G031529_P01 4a53 Zea mays 0 872 47 65 6 (6) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4651(3) Nup35_RRM(2) Nup35_RRM_2(3) PHM7_cyt(7) RL(4) RRM_1(5) RRM_5(5) RRM_7
TargetP:	Cytoplasm (Class 2 C0.089; M0.150; S0.017; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	816 aa (-cTP 766)
Molecular Weight	91.56 kDA(-cTP )
PI	6.66(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
20813957(SUMO proteome)

Comparative Proteomics Data