PPDB

The Plant Proteome Database

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AT4G19390.1   Uncharacterized protein family (UPF0114)

Lab Annot. unknown membrane protein
Mapman: 35.2 not assigned.unknown
Curated Location envelope (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G19390.2 11Arabidopsis thaliana1E-11918295970 (0)_
AT5G13720.1 11Arabidopsis thaliana8E-5418347689 (9)C
Os06g49640.1 7Oryza sativa3E-7517564830 (0)M
Os06g49640.2 7Oryza sativa6E-6315862820 (0)M
Os07g46330.1 7Oryza sativa3E-5618150700 (0)M
v1_GRMZM2G179292_P02 4a53Zea mays1E-71231516610 (10)C
Zm00001eb227610_P002 agpv5Zea mays1E-7123151660 (0)C
Zm00001eb227610_P001 agpv5Zea mays1E-7123151660 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: UPF0114(1)
TargetP: Chloroplast (Class 3 C0.745; M0.035; S0.004; _0.202)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 273 aa (-cTP 264)
Molecular Weight 30.04 kDA(-cTP 29.02)
PI 9.30(-cTP 9.26)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
873Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data


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