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AT4G19006.1
Proteasome component (PCI) domain protein
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| Lab Annot. |
26S proteasome regulatory subunit (RPN9b)
Mapman: 29.5.11.20.2* protein.degradation.ubiquitin.proteasome.26S |
| Curated Location |
cytosol
TAIR curated location: nucleus11742986 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
PCI(1) |
| TargetP: |
Cytoplasm (Class 1 C0.009; M0.054; S0.143; _0.988) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
386 aa (-cTP 362) |
| Molecular Weight |
44.02 kDA(-cTP ) |
| PI |
5.11(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 325 | Detail | | | | | | | | BY2 cell suspension [Tobacco] | cell wall enriched | wild-type |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 1345 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 1) |
| 1349 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 2) |
| 1350 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 3) |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1406 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1450 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1757 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 1930 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Col_0 Wild-type |
| 1931 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 1932 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | DXS_Flag |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2160 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp stroma | P3-strepII 13 |
| 2192 | Detail | | | | | | | | [A. thaliana] | total soluble | P3-trap-strepII 16 |
| 2214 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 st |
| 2215 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 trap st |
| 2216 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P5 st |
| 2224 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P3 strep |
| 2225 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Clp P3 trap |
| 2226 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2245 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2266 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp | Clp C1 wild-type |
| 2267 | Detail | | | | | | | | leaf [A. thaliana] | stroma Clp | Clp C1 TRAP |
| 2286 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2287 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2288 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2290 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2291 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2300 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2301 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2302 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2303 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2400 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1TRAPSTREP |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19546170(mature pollen grains)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
20516081(tagged-26S proteasome-affinity)
21325567(root-proteome (wt & det3))
21693672(wound-regulated leaf proteome (AOS mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
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Comparative Proteomics Data
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