PPDB

The Plant Proteome Database

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AT4G19003.1   E2F/DP family winged-helix DNA-binding domain-containing protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G19003.5 11Arabidopsis thaliana2E-1311791001000 (0)_
AT4G19003.6 11Arabidopsis thaliana2E-1311791001000 (0)_
AT4G19003.4 11Arabidopsis thaliana2E-1311791001000 (0)_
Os01g46932.1 7Oryza sativa9E-107179789022 (22)_
Os01g46932.2 7Oryza sativa9E-82139769122 (22)_
Zm00001eb157890_P003 agpv5Zea mays3E-10117975890 (0)M
Zm00001eb157890_P002 agpv5Zea mays3E-10117975890 (0)M
GRMZM5G822563_P01 3.21Zea mays3E-101179758912 (12)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ESCRT-II(1) LisH_TPL(2)
TargetP: Cytoplasm (Class 2 C0.029; M0.187; S0.141; _0.809)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 179 aa (-cTP 154)
Molecular Weight 20.68 kDA(-cTP )
PI 5.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


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