PPDB

The Plant Proteome Database

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AT4G18975.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18975.4 11Arabidopsis thaliana02871001000 (0)C
AT4G18975.3 11Arabidopsis thaliana02871001000 (0)C
AT4G18975.2 11Arabidopsis thaliana2E-17223598990 (0)S
Os07g36180.2 7Oryza sativa2E-9320762790 (0)C
Os07g36180.1 7Oryza sativa1E-6415363780 (0)C
Os01g55290.1 7Oryza sativa3E-4620741573 (3)C
Zm00001eb323500_P003 agpv5Zea mays4E-8920759780 (0)M
Zm00001eb323500_P004 agpv5Zea mays4E-8621657750 (0)M
GRMZM2G054155_P01 3.21Zea mays2E-7717761790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(2) PPR_2(3) PPR_long(1)
TargetP: Chloroplast (Class 4 C0.485; M0.187; S0.056; _0.156)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 287 aa (-cTP 253)
Molecular Weight 33.25 kDA(-cTP 29.49)
PI 9.59(-cTP 9.64)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help