PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G18970.1   GDSL-like Lipase/Acylhydrolase superfamily protein

Lab Annot. GDSL-motif lipase/hydrolase protein
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18970.2 11Arabidopsis thaliana03611001005 (5)S
AT5G45670.1 11Arabidopsis thaliana036283931 (1)S
AT1G29670.2 11Arabidopsis thaliana036167800 (0)M
Os05g44200.1 7Oryza sativa2E-167335668011 (11)S
Os01g52770.1 7Oryza sativa3E-164362607815 (15)S
Os01g54470.1 7Oryza sativa2E-16233963790 (0)C
v1_GRMZM2G478414_P02 4a53Zea mays3E-166358607917 (17)S
v1_GRMZM2G478414_P01 4a53Zea mays3E-166358607917 (17)S
Zm00001eb154280_P001 agpv5Zea mays3E-16635860790 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1)
TargetP: Secreted (Class 1 C0.008; M0.018; S0.980; _0.102)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 361 aa (-cTP 311)
Molecular Weight 39.60 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2247Detail       seedlings [A. thaliana] total tissue atg5
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help