PPDB

The Plant Proteome Database

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AT4G18840.1   Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18840.2 11Arabidopsis thaliana05451001000 (0)_
AT4G18840.3 11Arabidopsis thaliana05451001000 (0)_
AT5G15300.1 11Arabidopsis thaliana7E-12150437580 (0)_
Os03g07234.1 7Oryza sativa3E-11346937600 (0)_
Os07g44299.1 7Oryza sativa1E-11246240590 (0)_
Os08g39130.1 7Oryza sativa2E-11149635570 (0)_
GRMZM2G058133_P01 3.21Zea mays7E-12150438580 (0)M
Zm00001eb402420_P001 agpv5Zea mays7E-12150438580 (0)M
Zm00001eb402420_P002 agpv5Zea mays7E-12150438580 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3368(3) PPR(12) PPR_1(9) PPR_2(9) PPR_3(8) PPR_long(4) RPN7(1) TPR_1(3) TPR_1
TargetP: Cytoplasm (Class 1 C0.048; M0.063; S0.014; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 545 aa (-cTP 510)
Molecular Weight 60.84 kDA(-cTP )
PI 5.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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