PPDB

The Plant Proteome Database

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AT4G18750.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G16860.1 11Arabidopsis thaliana079639570 (0)_
AT3G03580.1 11Arabidopsis thaliana081139600 (0)C
AT1G11290.1 11Arabidopsis thaliana076337601 (1)C
Os01g10800.1 7Oryza sativa079151682 (2)C
Os04g39410.1 7Oryza sativa078239600 (0)M
Os05g49920.1 7Oryza sativa080836570 (0)C
Zm00001eb035760_P002 agpv5Zea mays079149670 (0)C
GRMZM2G076257_P01 3.21Zea mays0791496726 (26)C
v1_GRMZM2G076257_P01 4a53Zea mays0791496722 (22)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(4) DYW_deaminase(1) MNE1(2) Mtf2(3) PPR(15) PPR_1(15) PPR_2(13) PPR_3(8) PP
TargetP: Chloroplast (Class 2 C0.867; M0.076; S0.088; _0.021)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 871 aa (-cTP 843)
Molecular Weight 97.70 kDA(-cTP 94.51)
PI 6.31(-cTP 6.20)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help