PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G18740.1   Rho termination factor

Lab Annot. Rho termination factor
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18740.4 11Arabidopsis thaliana5E-15221998980 (0)_
AT4G18740.2 11Arabidopsis thaliana3E-14924587872 (1)M
AT4G18740.3 11Arabidopsis thaliana6E-12321984842 (1)_
v1_GRMZM2G364068_P03 4a53Zea mays8E-064055900 (0)C
GRMZM2G364068_P03 3.21Zea mays8E-064055900 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rho_N(1) SAP(2)
TargetP: Mitochondria (Class 5 C0.054; M0.303; S0.018; _0.209)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 245 aa (-cTP 167)
Molecular Weight 27.32 kDA(-cTP )
PI 9.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help