PPDB

The Plant Proteome Database

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AT4G18610.1   LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07090.1 11Arabidopsis thaliana6E-7114869813 (0)_
AT5G58500.1 11Arabidopsis thaliana1E-7013372860 (0)C
AT2G42610.2 11Arabidopsis thaliana1E-69126788797 (33)_
Os01g61310.1 7Oryza sativa4E-6113670860 (0)C
Os05g39500.1 7Oryza sativa9E-6114068830 (0)_
Os05g28040.1 7Oryza sativa1E-5713369840 (0)_
GRMZM2G030116_P01 3.21Zea mays3E-7013470860 (0)_
Zm00001eb286430_P001 agpv5Zea mays3E-7013470860 (0)_
v1_GRMZM2G030116_P01 4a53Zea mays3E-7013470860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF640(1)
TargetP: Chloroplast (Class 5 C0.780; M0.054; S0.030; _0.605)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 191 aa (-cTP 156)
Molecular Weight 21.74 kDA(-cTP 17.86)
PI 9.89(-cTP 9.97)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help