PPDB

 The Plant Proteome Database

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AT4G18570.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot. unknown protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G18570.2 11Arabidopsis thaliana0554991000 (0)C
AT3G25690.3 11Arabidopsis thaliana2E-99275587424 (16)S
AT3G25690.5 11Arabidopsis thaliana3E-9827558740 (0)S
Os01g46340.1 7Oryza sativa1E-12929369800 (0)C
Os05g49820.1 7Oryza sativa3E-12829071810 (0)C
Os08g03560.2 7Oryza sativa4E-9626959720 (0)_
Zm00001eb158220_P001 agpv5Zea mays4E-12629368800 (0)C
GRMZM2G047255_P01 3.21Zea mays4E-12629368800 (0)C
v1_GRMZM2G047255_P01 4a53Zea mays4E-12629368800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ADIP(1) DivIC(3) DUF29(2) Herpes_UL6(3) NRBF2(2) Phage_GP20(2) PsbQ(2) Spc7(2) T
TargetP: Chloroplast (Class 4 C0.550; M0.113; S0.002; _0.300)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 642 aa (-cTP 573)
Molecular Weight 71.61 kDA(-cTP 64.28)
PI 8.05(-cTP 5.90)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help