PPDB

PPDB	The Plant Proteome Database

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AT4G18465.1 RNA helicase family protein

Lab Annot.

RNA helicase, putative
Mapman: 27.1.2 RNA.processing.RNA helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G32490.2 11 Arabidopsis thaliana 0 649 48 69 2 (2) S
AT1G32490.1 11 Arabidopsis thaliana 0 649 48 69 2 (2) S
AT2G35340.1 11 Arabidopsis thaliana 0 666 47 67 0 (0) S
Os01g11370.1 7 Oryza sativa 0 690 75 87 0 (0) _
Os08g24760.1 7 Oryza sativa 0 649 48 70 1 (1) _
Os05g32370.1 7 Oryza sativa 0 658 47 68 0 (0) C
v1_GRMZM2G305060_P01 4a53 Zea mays 0 690 75 87 1 (1) _
GRMZM2G305060_P01 3.21 Zea mays 0 690 75 87 0 (0) _
Zm00001eb120110_P002 agpv5 Zea mays 0 690 75 87 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) AAA_23(1) AAA_29(1) AAA_30(1) AAA_7(1) ABC_tran(1) DEAD(1) H
TargetP:	Cytoplasm (Class 2 C0.138; M0.100; S0.025; _0.924)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	695 aa (-cTP 683)
Molecular Weight	77.71 kDA(-cTP )
PI	8.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2270	Detail								seedlings [A. thaliana]	total tissue	wild-type
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data